Run the GUI version of MixSIAR
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mixsiar_gui creates the GUI version of MixSIAR.
Usage
Details
Before running this function, a new user will need to install JAGSand GTK+. See Section 2 of the manual for install instructions:https://github.com/brianstock/MixSIAR/blob/master/inst/mixsiar_manual_small.pdf
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mixsiar_gui calls most of the other MixSIAR functions:
Value
mixsiar_gui itself returns nothing, but using the GUI createsR objects that you can access from the console:
mixsiar$mix: mixture data, output ofload_mix_data)mixsiar$source: source data, output ofload_source_data)mixsiar$discr: discrimination (TDF) data, output ofload_discr_datamixsiar$jags.1: rjags model object with MCMC chains, output ofrun_model
See Also
load_mix_data loads the mixture data file,
load_source_data loads the source data file,
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load_discr_data loads the TDF data file,
User Manual Pdf
plot_data creates an isospace plot,
plot_prior plots your prior and the uninformative prior,
write_JAGS_model creates a JAGS model file (.txt),
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run_model sets up JAGS objects and calls JAGS to run the model,
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output_JAGS processes the JAGS output (prints/saves diagnostics, summary statistics, and plots)
Aliases
- mixsiar_gui
Instruction Manual
Examples
